Looking at your log, you were never handed off from Departure at Geneva to a control sector.
I believe that the cause of your problem was the way your flight plan was loaded into PF3 with a SID (DIPI6A) and STAR (APLE1G) defined.
For this to work you should mark 'DIPIR' as the SID exit (DP), 'APPLE' as the STAR entry (ST) and exclude waypoints 1-5 and 29-33.
waypoint.0=LSGG, A, N46* 14.18',E6* 6.34',+001372.00
waypoint.1=RW22, I, N46* 15.01',E6* 7.37',+001411.00
waypoint.2=PAS, V, N46* 9.49',E5* 59.59',+005811.84
waypoint.3=PAS, I, N46* 8.25',E5* 57.55',+007000.00
waypoint.4=Intercept, I, N46* 15.42',E5* 54.51',+010426.59
waypoint.5=KELUK, I, N46* 33.20',E5* 41.08',+019463.48
waypoint.6=DIPIR, I, N46* 40.09',E5* 35.35',+022992.55
waypoint.7=LUKID, I, N46* 44.31',E5* 32.04',+025246.50
...
waypoint.27=HALIF, I, N53* 44.06',W1* 34.50',+030000.00
waypoint.28=APPLE, I, N54* 30.00',W2* 30.50',+030000.00
waypoint.29=ASLIB, I, N54* 49.27',W3* 3.39',+026000.00
waypoint.30=ENIPI, I, N55* 1.10',W3* 15.10',+022845.04
waypoint.31=ODIGI, I, N55* 11.44',W3* 25.39',+020000.00
waypoint.32=VAPPI, I, N55* 31.38',W3* 45.42',+011457.40
waypoint.33=LANAK, I, N55* 42.01',W3* 56.19',+007000.00
waypoint.34=EGPF, A, N55* 52.19',W4* 25.59',+000000.00
What happened is that PF3 was expecting you to pass waypoint 1, RW22, but you were always moving away from it rather than towards it.
If you try this flight again, with the suggestions above, then you should have a satisfactory flight.
Martin